人基底细胞癌定量PCR芯片试剂盒描述:
ScienCell's GeneQuery™ Human Basal Cell Carcinoma qPCR Array Kit (GQH-BCC) is designed to facilitate gene expression profiling of key genes involved in (i) basal cell carcinoma (BCC) biology and carcinogenesis; (ii) targeted BCC therapies; and (iii) hedgehog signaling pathway. 88 genes are selected in this kit based on database and literature research.
GeneQuery™ qPCR array kits are qPCR ready in a 96-well plate format, with each well containing one primer set that can specifically recognize and efficiently amplify a target gene's cDNA. The carefully designed primers ensure that: (i) the optimal annealing temperature in qPCR analysis is 65°C (with 2 mM Mg2+, and no DMSO); (ii) the primer set recognizes all known transcript variants of target gene, unless otherwise indicated; and (iii) only one gene is amplified. Each primer set has been validated by qPCR with melt curve analysis, and gel electrophoresis.
GeneQuery™ qPCR Array Kit Controls
Each GeneQuery™ plate contains eight controls (Figure 1).
Five target housekeeping genes (β-actin, GAPDH, LDHA, NONO, and PPIH), which enable normalization of data.
The Genomic DNA (gDNA) Control (GDC) detects possible gDNA contamination in the cDNA samples. It contains a primer set targeting a non-transcribed region of the genome.
Positive PCR Control (PPC) tests whether samples contain inhibitors or other factors that may negatively affect gene expression results. The PPC consists of a predispensed synthetic DNA template and a primer set that can amplify it. The sequence of the DNA template is not present in the human genome, and thus tests the efficiency of the polymerase chain reaction itself.
The No Template Control (NTC) is strongly recommended, and can be used to monitor the DNA contamination introduced during the workflow such as reagents, tips, and the lab bench.
GeneQuery™ Human Basal Cell Carcinoma qPCR Array Plate Layout* (8 controls in Bold and Italic)
|
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
A |
APC |
CD151 |
CSNK1G2 |
EIF4E |
FZD5 |
GSK3B |
LRP2 |
RAB23 |
TCF7L1 |
WNT11 |
WNT5B |
β-actin |
B |
APC2 |
CDH1 |
CSNK1G3 |
FAT2 |
FZD6 |
HHATL |
MC1R |
ROR2 |
TCF7L2 |
WNT16 |
WNT7A |
GAPDH |
C |
AXIN1 |
CEBPA |
CTNNB1 |
FBXW11 |
FZD7 |
HHIP |
NET1 |
SHFM1 |
TGFBR2 |
WNT2 |
WNT7B |
LDHA |
D |
AXIN2 |
CSNK1A1 |
DHH |
FZD1 |
FZD8 |
IFNA1 |
PARP1 |
SHH |
TP53 |
WNT2B |
WNT8A |
NONO |
E |
BMP2 |
CSNK1A1L |
DVL1 |
FZD10 |
FZD9 |
IHH |
PRKACA |
SMO |
TXN |
WNT3 |
WNT8B |
PPIH |
F |
BMP4 |
CSNK1D |
DVL2 |
FZD2 |
GAS1 |
KLF4 |
PRKACB |
STAT2 |
WNT1 |
WNT3A |
WNT9A |
GDC |
G |
BTRC |
CSNK1E |
DVL3 |
FZD3 |
GLI2 |
LEF1 |
PRKACG |
SUFU |
WNT10A |
WNT4 |
WNT9B |
PPC |
H |
CASP3 |
CSNK1G1 |
EGF |
FZD4 |
GLI3 |
LOC400927 |
PTCH1 |
TCF7 |
WNT10B |
WNT5A |
ZIC2 |
NTC |
* gene selection may be updated based on new research and development
产品使用说明:仅供科研研究使用
货号 |
GK015 |
产地 |
美国 |
缩写 |
GQH-BCC |
规格 |
One 96-well plate, one 20ul reaction per well |
用途 |
科研 |
保存 |
4°C or -20°C |
运输 |
常温 |
参考文献 |
[1] Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F. (2002) "Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes." Genome Biol. 3(7): 1-12. |
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